Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylaspartate mutase, s subunit | HMPREF3040_04577 | Not Available | Positive | 4340112 - 4340561 | 16444.7 |
| hypothetical protein | HMPREF3040_04578 | Not Available | Positive | 4340561 - 4341949 | 50513.4 |
| methylaspartate mutase, e subunit | HMPREF3040_04579 | Not Available | Positive | 4341968 - 4343413 | 53113.8 |
| methylaspartate ammonia-lyase | HMPREF3040_04580 | Not Available | Positive | 4343413 - 4344654 | 45550.7 |
| hypothetical protein | HMPREF3040_04581 | Not Available | Positive | 4344658 - 4346028 | 49071.5 |
| hypothetical protein | HMPREF3040_04582 | Not Available | Positive | 4346025 - 4346342 | 11912.4 |
| putative proton/sodium-glutamate symport protein gltt | HMPREF3040_04583 | Not Available | Positive | 4346491 - 4347783 | 45808.7 |
| fumarate hydratase class i | HMPREF3040_04584 | Not Available | Positive | 4347891 - 4349543 | 60083.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HMPREF3040_04585 | Not Available | Positive | 4349553 - 4350155 | 22373.7 |
| lysr substrate binding domain protein | HMPREF3040_04586 | Not Available | Negative | 4350189 - 4351094 | 34404.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





