Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04513 | Not Available | Positive | 4301671 - 4301967 | 10801.0 |
| enhancing lycopene biosynthesis protein 1 | HMPREF3040_04514 | Not Available | Negative | 4302099 - 4302434 | 12769.6 |
| hypothetical protein | HMPREF3040_04516 | Not Available | Negative | 4302560 - 4302709 | 5819.09 |
| hypothetical protein | HMPREF3040_04515 | Not Available | Positive | 4302680 - 4302883 | 7274.69 |
| hypothetical protein | HMPREF3040_04517 | Not Available | Positive | 4302880 - 4303041 | 5595.79 |
| lysis protein s | HMPREF3040_04518 | Not Available | Positive | 4303191 - 4303406 | 8026.76 |
| hypothetical protein | HMPREF3040_04519 | Not Available | Positive | 4303411 - 4304301 | 33271.8 |
| hypothetical protein | HMPREF3040_04544 | Not Available | Positive | 4318648 - 4318769 | 4804.08 |
| hypothetical protein | HMPREF3040_04545 | Not Available | Negative | 4318831 - 4319841 | 37698.9 |
| hypothetical protein | HMPREF3040_04546 | Not Available | Negative | 4319908 - 4321443 | 58042.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





