Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | HMPREF3040_04463 | Not Available | Negative | 4267504 - 4268130 | 24365.9 |
| hypothetical protein | HMPREF3040_04464 | Not Available | Positive | 4268554 - 4269294 | 28022.8 |
| class ii glutamine amidotransferase | HMPREF3040_04466 | Not Available | Negative | 4269265 - 4269810 | 20698.7 |
| hypothetical protein | HMPREF3040_04465 | Not Available | Positive | 4269802 - 4270038 | 8493.14 |
| phosphoheptose isomerase | HMPREF3040_04467 | Not Available | Negative | 4270238 - 4270834 | 21530.0 |
| acyl-coa dehydrogenase protein | HMPREF3040_04468 | Not Available | Positive | 4271056 - 4273500 | 89201.6 |
| inhibitor of vertebrate lysozyme | HMPREF3040_04469 | Not Available | Negative | 4273543 - 4274016 | 16873.2 |
| hydrolase, carbon-nitrogen family | HMPREF3040_04470 | Not Available | Positive | 4274170 - 4274940 | 29012.5 |
| integrating conjugative element protein, pfl_4695 family | HMPREF3040_04471 | Not Available | Negative | 4275212 - 4275484 | 10238.7 |
| hypothetical protein | HMPREF3040_04472 | Not Available | Negative | 4275791 - 4276294 | 18925.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





