Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide-inducible protein activator | HMPREF3040_04362 | Not Available | Negative | 4165366 - 4166328 | 35954.1 |
| argininosuccinate lyase | HMPREF3040_04364 | Not Available | Negative | 4166550 - 4167923 | 50321.1 |
| acetylglutamate kinase | HMPREF3040_04365 | Not Available | Negative | 4167984 - 4168793 | 28464.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | HMPREF3040_04366 | Not Available | Negative | 4168768 - 4169772 | 35964.2 |
| acetylornithine deacetylase arge | HMPREF3040_04367 | Not Available | Positive | 4169887 - 4171077 | 43746.4 |
| hypothetical protein | HMPREF3040_04368 | Not Available | Negative | 4171333 - 4171461 | 4565.63 |
| phosphoenolpyruvate carboxykinase | HMPREF3040_04369 | Not Available | Positive | 4171489 - 4174140 | 99082.3 |
| arylsulfatase | HMPREF3040_04370 | Not Available | Positive | 4174323 - 4176056 | 66601.4 |
| transcriptional regulator, arac family | HMPREF3040_04371 | Not Available | Positive | 4176311 - 4177162 | 32151.2 |
| pts system, fru family, iib component | HMPREF3040_04372 | Not Available | Negative | 4177149 - 4177490 | 12652.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





