Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein trav | HMPREF3040_04352 | Not Available | Negative | 4156968 - 4157407 | 15421.7 |
| conjugal transfer protein trbg | HMPREF3040_04353 | Not Available | Negative | 4157404 - 4157637 | 8499.04 |
| conjugal transfer protein trbd | HMPREF3040_04354 | Not Available | Negative | 4157649 - 4157969 | 11501.0 |
| trap protein | HMPREF3040_04355 | Not Available | Negative | 4157956 - 4158438 | 17916.5 |
| tonb-dependent vitamin b12 receptor | HMPREF3040_04356 | Not Available | Negative | 4159289 - 4161133 | 68424.7 |
| trna (uracil-5-)-methyltransferase | HMPREF3040_04357 | Not Available | Positive | 4161502 - 4162602 | 41939.3 |
| hypothetical protein | HMPREF3040_04358 | Not Available | Negative | 4162642 - 4163001 | 13024.3 |
| hth-type transcriptional repressor fabr | HMPREF3040_04359 | Not Available | Negative | 4163001 - 4163705 | 26554.9 |
| hypothetical protein | HMPREF3040_04360 | Not Available | Negative | 4163938 - 4164249 | 11451.8 |
| putative soluble pyridine nucleotide transhydrogenase | HMPREF3040_04361 | Not Available | Positive | 4164280 - 4165383 | 40806.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





