Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l34 | HMPREF3040_00173 | Not Available | Negative | 159624 - 159764 | 5380.74 |
| replication initiator protein dnaa | HMPREF3040_00174 | Not Available | Positive | 160359 - 161774 | 52940.2 |
| dna polymerase iii, beta subunit | HMPREF3040_00175 | Not Available | Positive | 161779 - 162879 | 40589.1 |
| dna replication and repair protein recf | HMPREF3040_00176 | Not Available | Positive | 162879 - 163952 | 40516.4 |
| dna gyrase, b subunit | HMPREF3040_00177 | Not Available | Positive | 163981 - 166395 | 89941.0 |
| hypothetical protein | HMPREF3040_00178 | Not Available | Positive | 166635 - 167033 | 13783.4 |
| cof-like hydrolase | HMPREF3040_00179 | Not Available | Positive | 167148 - 167960 | 29722.8 |
| hypothetical protein | HMPREF3040_00180 | Not Available | Negative | 168004 - 168777 | 28664.6 |
| fcd domain protein | HMPREF3040_00181 | Not Available | Positive | 168938 - 169627 | 26081.1 |
| 2-dehydro-3-deoxygalactonokinase | HMPREF3040_00182 | Not Available | Positive | 169624 - 170502 | 31381.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





