Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04322 | Not Available | Negative | 4130664 - 4131035 | 13515.8 |
| response regulator receiver domain protein | HMPREF3040_04323 | Not Available | Negative | 4131176 - 4131898 | 27657.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3040_04324 | Not Available | Negative | 4131895 - 4133298 | 51975.4 |
| transporter, major facilitator family protein | HMPREF3040_04325 | Not Available | Negative | 4133295 - 4134710 | 50997.4 |
| multidrug resistance protein mdtc | HMPREF3040_04326 | Not Available | Negative | 4134711 - 4137788 | 110972.0 |
| putative atp synthase f0, a subunit | HMPREF3040_04327 | Not Available | Negative | 4137789 - 4140911 | 112140.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF3040_04328 | Not Available | Negative | 4140911 - 4142158 | 44484.8 |
| hypothetical protein | HMPREF3040_04329 | Not Available | Positive | 4142557 - 4142733 | 6602.18 |
| hypothetical protein | HMPREF3040_04330 | Not Available | Positive | 4142802 - 4142915 | 4374.52 |
| ispsy21, transposase orfa | HMPREF3040_04331 | Not Available | Positive | 4143057 - 4143332 | 10555.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





