Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii aldolase, tagatose bisphosphate family | HMPREF3040_04311 | Not Available | Positive | 4120859 - 4121719 | 31129.2 |
| d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunit | HMPREF3040_04312 | Not Available | Positive | 4121748 - 4123010 | 47063.4 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF3040_04313 | Not Available | Positive | 4123020 - 4123472 | 16922.4 |
| galactitol-specific phosphotransferase enzyme iib component | HMPREF3040_04314 | Not Available | Positive | 4123503 - 4123787 | 10167.6 |
| galactitol permease iic component | HMPREF3040_04315 | Not Available | Positive | 4123791 - 4125146 | 48268.9 |
| galactitol-1-phosphate 5-dehydrogenase | HMPREF3040_04316 | Not Available | Positive | 4125194 - 4126234 | 37400.4 |
| transcriptional regulator, deor family | HMPREF3040_04317 | Not Available | Positive | 4126334 - 4127113 | 27960.9 |
| lipid kinase yegs | HMPREF3040_04318 | Not Available | Negative | 4127195 - 4128094 | 32107.7 |
| hypothetical protein | HMPREF3040_04319 | Not Available | Positive | 4128494 - 4128826 | 11882.4 |
| peptidase, u32 family | HMPREF3040_04321 | Not Available | Negative | 4129155 - 4130516 | 51168.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





