Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor rcnr | HMPREF3040_04301 | Not Available | Positive | 4112353 - 4112625 | 10134.5 |
| hydroxyethylthiazole kinase | HMPREF3040_04302 | Not Available | Positive | 4112848 - 4113636 | 27368.9 |
| phosphomethylpyrimidine kinase | HMPREF3040_04303 | Not Available | Positive | 4113633 - 4114433 | 28666.3 |
| glycosyl hydrolase family 25 | HMPREF3040_04304 | Not Available | Positive | 4114489 - 4115316 | 32017.4 |
| ubic transcription regulator-associated domain protein | HMPREF3040_04305 | Not Available | Positive | 4115368 - 4116114 | 28278.8 |
| kinase, pfkb family | HMPREF3040_04306 | Not Available | Negative | 4116088 - 4117053 | 34365.4 |
| adp-ribosylglycohydrolase | HMPREF3040_04307 | Not Available | Negative | 4117050 - 4118054 | 35678.6 |
| nucleoside transporter | HMPREF3040_04308 | Not Available | Negative | 4118051 - 4119328 | 47337.8 |
| hypothetical protein | HMPREF3040_04309 | Not Available | Negative | 4119325 - 4119474 | 6077.66 |
| deoxyribose-phosphate aldolase | HMPREF3040_04310 | Not Available | Positive | 4119513 - 4120637 | 40908.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





