Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase | HMPREF3040_00163 | Not Available | Negative | 148882 - 149448 | 20376.8 |
| hypothetical protein | HMPREF3040_00164 | Not Available | Negative | 149470 - 150072 | 22148.5 |
| transcriptional regulator, lysr family | HMPREF3040_00165 | Not Available | Negative | 150376 - 151335 | 36954.0 |
| multidrug resistance protein mdtl | HMPREF3040_00166 | Not Available | Negative | 151310 - 152485 | 41565.2 |
| tryptophan-specific transport protein | HMPREF3040_00167 | Not Available | Negative | 152618 - 153865 | 45167.2 |
| tryptophan 2,3-dioxygenase | HMPREF3040_00168 | Not Available | Negative | 153956 - 155386 | 53413.2 |
| trna modification gtpase trme | HMPREF3040_00169 | Not Available | Negative | 155908 - 157272 | 49257.8 |
| membrane protein insertase, yidc/oxa1 family domain protein | HMPREF3040_00170 | Not Available | Negative | 157378 - 159024 | 61543.5 |
| hypothetical protein | HMPREF3040_00171 | Not Available | Negative | 159027 - 159272 | 9003.12 |
| ribonuclease p protein component | HMPREF3040_00172 | Not Available | Negative | 159248 - 159607 | 13790.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





