Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine-binding periplasmic protein | HMPREF3040_04231 | Not Available | Positive | 4027134 - 4028321 | 43903.4 |
| polyamine abc transporter, atp-binding protein | HMPREF3040_04232 | Not Available | Positive | 4028335 - 4029549 | 44820.7 |
| putrescine transport system permease protein poth | HMPREF3040_04233 | Not Available | Positive | 4029559 - 4030503 | 35256.4 |
| putative spermidine/putrescine abc transporter, permease protein potc | HMPREF3040_04234 | Not Available | Positive | 4030500 - 4031345 | 30445.3 |
| hypothetical protein | HMPREF3040_04235 | Not Available | Positive | 4031405 - 4031893 | 18519.1 |
| 23s rrna (uracil-5-)-methyltransferase rumb | HMPREF3040_04236 | Not Available | Positive | 4031934 - 4033061 | 41948.1 |
| putative sugar-specific permease, sgat/ulaa | HMPREF3040_04237 | Not Available | Positive | 4033342 - 4034685 | 48565.7 |
| pts system, lactose/cellobiose specific iib subunit | HMPREF3040_04238 | Not Available | Positive | 4034707 - 4035027 | 11814.4 |
| arylsulfatase | HMPREF3040_04239 | Not Available | Positive | 4035040 - 4036521 | 57053.6 |
| arginine abc transporter, periplasmic arginine-binding protein artj | HMPREF3040_04240 | Not Available | Negative | 4036572 - 4037354 | 28753.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





