Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq enzyme repeat protein | HMPREF3040_04210 | Not Available | Positive | 4014735 - 4015697 | 35060.8 |
| putative proline-specific permease proy | HMPREF3040_04211 | Not Available | Negative | 4015810 - 4017354 | 55910.3 |
| hypothetical protein | HMPREF3040_04212 | Not Available | Positive | 4017379 - 4017528 | 5311.51 |
| hypothetical protein | HMPREF3040_04213 | Not Available | Positive | 4017576 - 4018193 | 23387.2 |
| hypothetical protein | HMPREF3040_04215 | Not Available | Negative | 4018612 - 4018755 | 5294.52 |
| hypothetical protein | HMPREF3040_04214 | Not Available | Positive | 4018733 - 4019017 | 9559.37 |
| hypothetical protein | HMPREF3040_04216 | Not Available | Positive | 4019036 - 4019273 | 8817.67 |
| hypothetical protein | HMPREF3040_04218 | Not Available | Negative | 4019274 - 4019587 | 11685.4 |
| hypothetical protein | HMPREF3040_04217 | Not Available | Positive | 4019556 - 4019981 | 15623.5 |
| hypothetical protein | HMPREF3040_04219 | Not Available | Positive | 4019872 - 4020267 | 14908.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





