Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminobutyraldehyde dehydrogenase | HMPREF3040_04200 | Not Available | Positive | 4005570 - 4006994 | 50803.8 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_04201 | Not Available | Positive | 4007217 - 4008026 | 31112.3 |
| hypothetical protein | HMPREF3040_04202 | Not Available | Positive | 4008643 - 4008891 | 9614.24 |
| hypothetical protein | HMPREF3040_04203 | Not Available | Positive | 4008977 - 4009210 | 8800.41 |
| hypothetical protein | HMPREF3040_04204 | Not Available | Negative | 4009211 - 4009660 | 15834.0 |
| toxin-antitoxin system, toxin component, gnat family | HMPREF3040_04205 | Not Available | Negative | 4009657 - 4010175 | 19249.7 |
| oxidoreductase, zinc-binding dehydrogenase family protein | HMPREF3040_04206 | Not Available | Positive | 4010332 - 4011393 | 38493.1 |
| hth-type transcriptional regulator mcbr | HMPREF3040_04207 | Not Available | Positive | 4011591 - 4012256 | 25266.1 |
| tonb-dependent receptor | HMPREF3040_04208 | Not Available | Negative | 4012292 - 4013026 | 27172.4 |
| tonb-dependent receptor plug domain protein | HMPREF3040_04209 | Not Available | Negative | 4013180 - 4014553 | 50744.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





