Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04180 | Not Available | Positive | 3987028 - 3988371 | 51169.8 |
| glucans biosynthesis protein d | HMPREF3040_04181 | Not Available | Positive | 3988626 - 3990251 | 61523.7 |
| hypothetical protein | HMPREF3040_04182 | Not Available | Positive | 3990391 - 3990615 | 8878.79 |
| ribosomal-protein-serine acetyltransferase | HMPREF3040_04183 | Not Available | Positive | 3990678 - 3991217 | 20585.6 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_04184 | Not Available | Negative | 3991209 - 3992189 | 35828.3 |
| c4-dicarboxylate transporter/malic acid transport protein | HMPREF3040_04185 | Not Available | Positive | 3992301 - 3993305 | 36471.2 |
| tellurite resistance protein tehb | HMPREF3040_04186 | Not Available | Positive | 3993302 - 3993895 | 22421.9 |
| hypothetical protein | HMPREF3040_04187 | Not Available | Positive | 3994046 - 3994165 | 4252.24 |
| hypothetical protein | HMPREF3040_04188 | Not Available | Positive | 3994197 - 3994865 | 24353.2 |
| benzoate transporter | HMPREF3040_04189 | Not Available | Negative | 3994900 - 3996111 | 42079.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





