Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide transport system atp-binding protein sapf | HMPREF3040_04106 | Not Available | Negative | 3901846 - 3902652 | 30572.5 |
| peptide transport system atp-binding protein sapd | HMPREF3040_04107 | Not Available | Negative | 3902654 - 3903646 | 37662.9 |
| peptide transport system permease protein sapc | HMPREF3040_04108 | Not Available | Negative | 3903646 - 3904536 | 31550.0 |
| peptide transport system permease protein sapb | HMPREF3040_04109 | Not Available | Negative | 3904523 - 3905488 | 36026.1 |
| putative peptide transport periplasmic protein sapa | HMPREF3040_04110 | Not Available | Negative | 3905485 - 3906558 | 39904.8 |
| hypothetical protein | HMPREF3040_04111 | Not Available | Positive | 3906571 - 3906963 | 14020.3 |
| hypothetical protein | HMPREF3040_04112 | Not Available | Negative | 3907441 - 3907686 | 9280.74 |
| amino acid permease | HMPREF3040_04113 | Not Available | Negative | 3907820 - 3909205 | 50832.9 |
| glutamate--ammonia ligase, catalytic domain protein | HMPREF3040_04114 | Not Available | Negative | 3909508 - 3910926 | 53180.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | HMPREF3040_04115 | Not Available | Positive | 3911138 - 3911902 | 28014.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





