Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | HMPREF3040_04086 | Not Available | Positive | 3883849 - 3884823 | 36152.5 |
| hypothetical protein | HMPREF3040_04087 | Not Available | Positive | 3885142 - 3885282 | 5337.71 |
| hypothetical protein | HMPREF3040_04088 | Not Available | Positive | 3885285 - 3885452 | 6334.21 |
| hypothetical protein | HMPREF3040_04089 | Not Available | Negative | 3885526 - 3885651 | 4872.9 |
| aconitate hydratase 1 | HMPREF3040_04090 | Not Available | Positive | 3885825 - 3888500 | 97926.1 |
| gtp cyclohydrolase ii | HMPREF3040_04091 | Not Available | Negative | 3888564 - 3889217 | 24468.4 |
| phosphatidylglycerophosphatase b | HMPREF3040_04092 | Not Available | Positive | 3889324 - 3890088 | 28992.8 |
| hypothetical protein | HMPREF3040_04093 | Not Available | Positive | 3890237 - 3890545 | 11324.1 |
| tetratricopeptide repeat protein | HMPREF3040_04094 | Not Available | Positive | 3890552 - 3891721 | 44503.5 |
| hypothetical protein | HMPREF3040_04096 | Not Available | Negative | 3891745 - 3891897 | 5124.18 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





