Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04066 | Not Available | Negative | 3862914 - 3863657 | 26406.5 |
| outer membrane protein w | HMPREF3040_04067 | Not Available | Positive | 3864014 - 3864652 | 22945.1 |
| hypothetical protein | HMPREF3040_04068 | Not Available | Negative | 3864712 - 3865218 | 18999.6 |
| hypothetical protein | HMPREF3040_04069 | Not Available | Negative | 3865264 - 3865764 | 18598.2 |
| hypothetical protein | HMPREF3040_04070 | Not Available | Negative | 3865850 - 3866029 | 6002.69 |
| tryptophan synthase, alpha subunit | HMPREF3040_04071 | Not Available | Negative | 3866410 - 3867216 | 28728.8 |
| tryptophan synthase, beta subunit | HMPREF3040_04072 | Not Available | Negative | 3867216 - 3868409 | 42981.6 |
| indole-3-glycerol phosphate synthase | HMPREF3040_04073 | Not Available | Negative | 3868421 - 3869782 | 49405.0 |
| anthranilate phosphoribosyltransferase | HMPREF3040_04074 | Not Available | Negative | 3869783 - 3871378 | 56874.3 |
| anthranilate synthase component i | HMPREF3040_04075 | Not Available | Negative | 3871378 - 3872940 | 57520.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





