Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter, atp-binding protein oppd | HMPREF3040_04056 | Not Available | Positive | 3854747 - 3855760 | 37148.7 |
| oligopeptide abc transporter, atp-binding protein appf | HMPREF3040_04057 | Not Available | Positive | 3855757 - 3856761 | 37183.8 |
| hypothetical protein | HMPREF3040_04058 | Not Available | Negative | 3856814 - 3857143 | 12687.7 |
| cardiolipin synthetase | HMPREF3040_04059 | Not Available | Negative | 3857178 - 3858638 | 54825.6 |
| hypothetical protein | HMPREF3040_04060 | Not Available | Positive | 3858670 - 3858954 | 11038.9 |
| putative potassium channel protein | HMPREF3040_04061 | Not Available | Negative | 3859009 - 3860217 | 44335.2 |
| hypothetical protein | HMPREF3040_04062 | Not Available | Negative | 3860563 - 3860955 | 14182.0 |
| tonb-dependent receptor | HMPREF3040_04063 | Not Available | Positive | 3861068 - 3861802 | 26613.4 |
| thioesterase family protein | HMPREF3040_04064 | Not Available | Negative | 3861842 - 3862186 | 12296.0 |
| intracellular septation protein a | HMPREF3040_04065 | Not Available | Negative | 3862345 - 3862884 | 20791.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





