Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00144 | Not Available | Positive | 127139 - 127723 | 22646.0 |
| kinase, pfkb family | HMPREF3040_00145 | Not Available | Negative | 127695 - 128690 | 36533.2 |
| hypothetical protein | HMPREF3040_00147 | Not Available | Negative | 128708 - 128887 | 6803.64 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3040_00146 | Not Available | Positive | 128856 - 129623 | 29662.9 |
| asma family protein | HMPREF3040_00148 | Not Available | Positive | 129678 - 131753 | 75250.8 |
| mfs transporter, metabolite:h+ symporter family protein | HMPREF3040_00149 | Not Available | Negative | 131935 - 133257 | 47210.9 |
| putative ribonuclease | HMPREF3040_00150 | Not Available | Negative | 133674 - 134687 | 37961.6 |
| lysr substrate binding domain protein | HMPREF3040_00151 | Not Available | Negative | 134736 - 135707 | 36118.0 |
| transcriptional regulator, luxr family | HMPREF3040_00152 | Not Available | Positive | 136155 - 136757 | 22575.5 |
| alpha,alpha-trehalase | HMPREF3040_00153 | Not Available | Negative | 136808 - 138457 | 63700.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





