Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04006 | Not Available | Negative | 3807944 - 3809146 | 46656.7 |
| hypothetical protein | HMPREF3040_04007 | Not Available | Negative | 3809139 - 3809339 | 7708.26 |
| hypothetical protein | HMPREF3040_04008 | Not Available | Negative | 3809381 - 3810604 | 46074.4 |
| metallo-beta-lactamase domain protein | HMPREF3040_04009 | Not Available | Negative | 3810597 - 3811583 | 36819.2 |
| hypothetical protein | HMPREF3040_04010 | Not Available | Negative | 3811972 - 3812136 | 6015.18 |
| hypothetical protein | HMPREF3040_04011 | Not Available | Negative | 3812256 - 3814325 | 76599.3 |
| transcriptional regulator, alpa family | HMPREF3040_04012 | Not Available | Negative | 3814361 - 3814576 | 8210.82 |
| hypothetical protein | HMPREF3040_04013 | Not Available | Negative | 3814911 - 3815303 | 14387.5 |
| hypothetical protein | HMPREF3040_04014 | Not Available | Negative | 3815512 - 3816051 | 20456.0 |
| hypothetical protein | HMPREF3040_04015 | Not Available | Positive | 3816503 - 3817675 | 45117.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





