Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03986 | Not Available | Negative | 3789922 - 3790197 | 10670.8 |
| hypothetical protein | HMPREF3040_03987 | Not Available | Negative | 3790222 - 3790848 | 24027.2 |
| site-specific recombinase, phage integrase family | HMPREF3040_03988 | Not Available | Positive | 3791158 - 3791760 | 23080.2 |
| cbs domain protein | HMPREF3040_03989 | Not Available | Positive | 3792114 - 3793211 | 41562.4 |
| hypothetical protein | HMPREF3040_03990 | Not Available | Negative | 3793542 - 3794612 | 40775.6 |
| riboflavin biosynthesis protein ribd protein | HMPREF3040_03991 | Not Available | Positive | 3794789 - 3795325 | 19955.1 |
| hypothetical protein | HMPREF3040_03992 | Not Available | Negative | 3795399 - 3795530 | 4735.81 |
| abc transporter, substrate-binding protein, family 5 | HMPREF3040_03993 | Not Available | Negative | 3795677 - 3797356 | 65228.1 |
| pts system, glucose-specific iibc component | HMPREF3040_03994 | Not Available | Positive | 3797579 - 3799105 | 55308.8 |
| glucose-6-phosphate isomerase | HMPREF3040_03995 | Not Available | Positive | 3799102 - 3799944 | 31883.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





