Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03915 | Not Available | Negative | 3729199 - 3729681 | 18595.2 |
| hypothetical protein | HMPREF3040_03916 | Not Available | Positive | 3729693 - 3731951 | 85448.0 |
| glycosyl transferase family, helical bundle domain protein | HMPREF3040_03917 | Not Available | Positive | 3731979 - 3732941 | 35085.7 |
| malate/l-lactate dehydrogenase | HMPREF3040_03918 | Not Available | Positive | 3733082 - 3734167 | 38884.3 |
| hypothetical protein | HMPREF3040_03919 | Not Available | Negative | 3734215 - 3734346 | 5203.29 |
| putative multiple stress resistance protein bhsa | HMPREF3040_03920 | Not Available | Negative | 3734396 - 3734656 | 8555.2 |
| phage/conjugal plasmid c-4 type zinc finger protein, trar family | HMPREF3040_03921 | Not Available | Negative | 3734921 - 3735187 | 9804.42 |
| oxidoreductase, 2og-fe(ii) oxygenase family protein | HMPREF3040_03922 | Not Available | Negative | 3735261 - 3735938 | 25467.1 |
| catecholate siderophore receptor fiu | HMPREF3040_03923 | Not Available | Negative | 3735980 - 3738181 | 78885.8 |
| hypothetical protein | HMPREF3040_03924 | Not Available | Positive | 3738224 - 3738472 | 9451.85 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





