Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HMPREF3040_03553 | Not Available | Negative | 3425077 - 3425355 | 10925.2 |
| Hypothetical protein | HMPREF3040_03554 | Not Available | Negative | 3425403 - 3425621 | 8230.79 |
| Hypothetical protein | HMPREF3040_03555 | Not Available | Negative | 3425714 - 3425935 | 8310.14 |
| Hypothetical protein | HMPREF3040_03556 | Not Available | Negative | 3426012 - 3426203 | 6961.36 |
| Hypothetical protein | HMPREF3040_03557 | Not Available | Negative | 3426176 - 3426364 | 7042.77 |
| Exonuclease | HMPREF3040_03558 | Not Available | Negative | 3426355 - 3427035 | 25870.8 |
| Recombination protein bet | HMPREF3040_03559 | Not Available | Negative | 3427032 - 3427817 | 29720.3 |
| Host-nuclease inhibitor protein gam | HMPREF3040_03560 | Not Available | Negative | 3427823 - 3428119 | 11628.5 |
| Kil protein | HMPREF3040_03561 | Not Available | Negative | 3428195 - 3428485 | 10779.0 |
| Hypothetical protein | HMPREF3040_03562 | Not Available | Negative | 3428884 - 3429816 | 34534.7 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





