Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | HMPREF3040_03895 | Not Available | Positive | 3709366 - 3710043 | 24079.8 |
| excinuclease abc, b subunit | HMPREF3040_03896 | Not Available | Positive | 3710622 - 3712643 | 76230.6 |
| hypothetical protein | HMPREF3040_03897 | Not Available | Negative | 3712790 - 3713698 | 32731.9 |
| molybdenum cofactor biosynthesis protein a | HMPREF3040_03898 | Not Available | Positive | 3714026 - 3715084 | 39839.8 |
| molybdenum cofactor biosynthesis protein b | HMPREF3040_03899 | Not Available | Positive | 3715106 - 3715618 | 18666.1 |
| molybdenum cofactor biosynthesis protein | HMPREF3040_03900 | Not Available | Positive | 3715621 - 3716106 | 17468.3 |
| molybdopterin converting factor, subunit 1 | HMPREF3040_03901 | Not Available | Positive | 3716099 - 3716344 | 8740.36 |
| molybdopterin converting factor, subunit 2 | HMPREF3040_03902 | Not Available | Positive | 3716346 - 3716798 | 17010.0 |
| hypothetical protein | HMPREF3040_03903 | Not Available | Positive | 3716995 - 3717639 | 23583.7 |
| hypothetical protein | HMPREF3040_03904 | Not Available | Positive | 3717844 - 3718233 | 14561.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





