Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 31 | HMPREF3040_03827 | Not Available | Positive | 3660697 - 3661851 | 44350.6 |
| integrase core domain protein | HMPREF3040_03828 | Not Available | Positive | 3662096 - 3663268 | 45855.9 |
| istb-like atp-binding protein | HMPREF3040_03829 | Not Available | Positive | 3663268 - 3664065 | 30530.3 |
| putative pectinesterase b | HMPREF3040_03830 | Not Available | Negative | 3664237 - 3665520 | 46024.6 |
| hypothetical protein | HMPREF3040_03889 | Not Available | Positive | 3704183 - 3704308 | 4592.4 |
| raf-like protein | HMPREF3040_03890 | Not Available | Negative | 3704529 - 3705005 | 17058.0 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase | HMPREF3040_03891 | Not Available | Negative | 3705064 - 3706464 | 51500.7 |
| biotin synthase | HMPREF3040_03892 | Not Available | Positive | 3706464 - 3707480 | 37632.1 |
| 8-amino-7-oxononanoate synthase | HMPREF3040_03893 | Not Available | Positive | 3707477 - 3708631 | 41535.5 |
| biotin biosynthesis protein bioc | HMPREF3040_03894 | Not Available | Positive | 3708618 - 3709373 | 28275.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





