Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter, permease protein | HMPREF3040_03788 | Not Available | Negative | 3617666 - 3618628 | 33128.2 |
| abc transporter, atp-binding protein | HMPREF3040_03789 | Not Available | Negative | 3618702 - 3620222 | 56013.4 |
| sugar-binding domain protein | HMPREF3040_03790 | Not Available | Negative | 3620514 - 3621470 | 34314.5 |
| hypothetical protein | HMPREF3040_03791 | Not Available | Positive | 3621622 - 3621768 | 5619.71 |
| inorganic diphosphatase | HMPREF3040_03792 | Not Available | Positive | 3621780 - 3622310 | 19732.6 |
| hypothetical protein | HMPREF3040_03793 | Not Available | Negative | 3622317 - 3622469 | 5374.56 |
| aig2-like family protein | HMPREF3040_03794 | Not Available | Negative | 3622690 - 3623031 | 12867.2 |
| hypothetical protein | HMPREF3040_03795 | Not Available | Negative | 3623034 - 3626813 | 136757.0 |
| outer membrane protein, omp85 family | HMPREF3040_03796 | Not Available | Negative | 3626810 - 3628543 | 64827.7 |
| peptide-methionine (s)-s-oxide reductase | HMPREF3040_03797 | Not Available | Positive | 3628722 - 3629387 | 24418.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





