Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-phosphotrehalase | HMPREF3040_03778 | Not Available | Positive | 3606561 - 3608216 | 63878.1 |
| hypothetical protein | HMPREF3040_03779 | Not Available | Negative | 3608448 - 3608570 | 4323.22 |
| anaerobic ribonucleoside-triphosphate reductase | HMPREF3040_03780 | Not Available | Positive | 3608625 - 3610748 | 79461.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | HMPREF3040_03781 | Not Available | Positive | 3611028 - 3611342 | 11851.4 |
| soluble cytochrome b562 | HMPREF3040_03782 | Not Available | Negative | 3611387 - 3611773 | 14061.7 |
| protein pmba | HMPREF3040_03783 | Not Available | Negative | 3611956 - 3613308 | 48372.4 |
| hypothetical protein | HMPREF3040_03784 | Not Available | Positive | 3613402 - 3613953 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | HMPREF3040_03785 | Not Available | Negative | 3614104 - 3615441 | 48565.3 |
| fructose-1,6-bisphosphatase | HMPREF3040_03786 | Not Available | Positive | 3615470 - 3616651 | 43940.8 |
| branched-chain amino acid abc transporter, permease protein | HMPREF3040_03787 | Not Available | Negative | 3616684 - 3617679 | 35008.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





