Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03758 | Not Available | Negative | 3590653 - 3591876 | 45966.6 |
| acetyltransferase, gnat family | HMPREF3040_03759 | Not Available | Positive | 3592042 - 3592545 | 18609.4 |
| hypothetical protein | HMPREF3040_03760 | Not Available | Negative | 3592591 - 3593007 | 15603.5 |
| ornithine carbamoyltransferase | HMPREF3040_03761 | Not Available | Positive | 3593169 - 3594173 | 36865.1 |
| hypothetical protein | HMPREF3040_03762 | Not Available | Negative | 3594274 - 3594504 | 9336.44 |
| hypothetical protein | HMPREF3040_03763 | Not Available | Negative | 3594491 - 3594844 | 13898.5 |
| hypothetical protein | HMPREF3040_03764 | Not Available | Negative | 3594860 - 3595834 | 36593.4 |
| yhch/yjgk/yial family protein | HMPREF3040_03765 | Not Available | Negative | 3595956 - 3596408 | 16896.3 |
| transcriptional regulator, tetr family | HMPREF3040_03766 | Not Available | Negative | 3596553 - 3597146 | 21399.6 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3040_03767 | Not Available | Positive | 3597217 - 3597930 | 24631.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





