Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose biosynthesis protein bcse | HMPREF3040_00128 | Not Available | Negative | 107709 - 109280 | 59468.6 |
| hypothetical protein | HMPREF3040_00129 | Not Available | Positive | 109552 - 109740 | 7032.31 |
| cellulose synthase operon protein yhjq | HMPREF3040_00130 | Not Available | Positive | 109752 - 110504 | 27961.5 |
| hypothetical protein | HMPREF3040_00131 | Not Available | Positive | 110501 - 110770 | 10645.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 110607 - 110721 | Not Available |
| cellulose synthase catalytic subunit | HMPREF3040_00132 | Not Available | Positive | 110857 - 113118 | 85536.7 |
| bacterial cellulose synthase subunit | HMPREF3040_00133 | Not Available | Positive | 113129 - 115468 | 86099.6 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 113224 - 113449 | Not Available |
| endoglucanase | HMPREF3040_00134 | Not Available | Positive | 115475 - 116581 | 41762.5 |
| tetratricopeptide repeat protein | HMPREF3040_00135 | Not Available | Positive | 116563 - 117759 | 43173.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





