Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain protein | HMPREF3040_03738 | Not Available | Negative | 3571267 - 3571808 | 19578.0 |
| hypothetical protein | HMPREF3040_03739 | Not Available | Positive | 3571884 - 3572546 | 25068.1 |
| plasmid stabilization system protein, rele/pare family | HMPREF3040_03740 | Not Available | Negative | 3572582 - 3572881 | 11545.6 |
| hypothetical protein | HMPREF3040_03741 | Not Available | Negative | 3572871 - 3573134 | 9963.68 |
| hypothetical protein | HMPREF3040_03742 | Not Available | Negative | 3573241 - 3573462 | 8250.38 |
| hypothetical protein | HMPREF3040_03743 | Not Available | Positive | 3573463 - 3574072 | 23011.4 |
| hypothetical protein | HMPREF3040_03744 | Not Available | Negative | 3574115 - 3574762 | 24423.5 |
| Trna-leu | Not Available | Not Available | Positive | 3575023 - 3575107 | Not Available |
| groes-like protein | HMPREF3040_03746 | Not Available | Positive | 3575261 - 3576322 | 38155.9 |
| shikimate kinase | HMPREF3040_03747 | Not Available | Negative | 3576326 - 3576889 | 21005.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





