Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03718 | Not Available | Positive | 3555218 - 3555400 | 7276.57 |
| hypothetical protein | HMPREF3040_03719 | Not Available | Negative | 3555800 - 3556006 | 7819.88 |
| hypothetical protein | HMPREF3040_03720 | Not Available | Positive | 3556156 - 3556308 | 5700.78 |
| hypothetical protein | HMPREF3040_03722 | Not Available | Negative | 3556316 - 3556570 | 9405.64 |
| replicase family protein | HMPREF3040_03721 | Not Available | Positive | 3556559 - 3556849 | 10781.8 |
| primase alpha helix protein | HMPREF3040_03723 | Not Available | Positive | 3556846 - 3557106 | 10001.0 |
| hypothetical protein | HMPREF3040_03725 | Not Available | Negative | 3557317 - 3557451 | 5408.59 |
| hypothetical protein | HMPREF3040_03724 | Not Available | Positive | 3557438 - 3558313 | 32810.0 |
| tonb family domain protein | HMPREF3040_03726 | Not Available | Positive | 3558321 - 3559097 | 28685.2 |
| tonb-dependent receptor | HMPREF3040_03727 | Not Available | Positive | 3559266 - 3561527 | 82763.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





