Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial transferase hexapeptide repeat protein | HMPREF3040_03687 | Not Available | Negative | 3534970 - 3535422 | 16090.5 |
| hypothetical protein | HMPREF3040_03688 | Not Available | Negative | 3535526 - 3535669 | 5410.66 |
| hypothetical protein | HMPREF3040_03689 | Not Available | Positive | 3536028 - 3536174 | 4595.8 |
| putative microcin b17-processing protein mcbb | HMPREF3040_03690 | Not Available | Positive | 3536188 - 3537075 | 33971.2 |
| sagb-type dehydrogenase domain protein | HMPREF3040_03691 | Not Available | Positive | 3537077 - 3537895 | 30754.8 |
| putative microcin b17-processing protein mcbd | HMPREF3040_03692 | Not Available | Positive | 3537876 - 3539066 | 44922.6 |
| putative protein mcbe | HMPREF3040_03693 | Not Available | Positive | 3539076 - 3539801 | 27802.8 |
| abc transporter, atp-binding protein | HMPREF3040_03694 | Not Available | Positive | 3539798 - 3540529 | 27992.0 |
| pentapeptide repeat protein | HMPREF3040_03695 | Not Available | Positive | 3540533 - 3541096 | 21849.4 |
| transposase | HMPREF3040_03696 | Not Available | Negative | 3541664 - 3544213 | 95240.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





