Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 101880 - 101977 | Not Available |
| [acyl-carrier-protein] s-malonyltransferase | HMPREF3040_00121 | Not Available | Positive | 102160 - 103089 | 32419.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | HMPREF3040_00122 | Not Available | Positive | 103102 - 103836 | 25561.9 |
| acyl carrier protein | HMPREF3040_00123 | Not Available | Positive | 104047 - 104283 | 8639.99 |
| beta-ketoacyl-acyl-carrier-protein synthase ii | HMPREF3040_00124 | Not Available | Positive | 104407 - 105612 | 41763.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 104509 - 104657 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 104842 - 104958 | Not Available |
| hypothetical protein | HMPREF3040_00125 | Not Available | Positive | 105693 - 105758 | 2148.75 |
| cellulose synthase operon protein yhju | HMPREF3040_00126 | Not Available | Negative | 105845 - 107524 | 62019.3 |
| celllulose biosynthesis operon protein bcsf/yhjt | HMPREF3040_00127 | Not Available | Negative | 107521 - 107712 | 7364.39 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





