Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--hexose-1-phosphate uridylyltransferase | HMPREF3040_03627 | Not Available | Negative | 3470585 - 3471631 | 39610.6 |
| udp-glucose 4-epimerase | HMPREF3040_03628 | Not Available | Negative | 3471641 - 3472699 | 39012.5 |
| abc transporter, atp-binding protein | HMPREF3040_03629 | Not Available | Negative | 3472920 - 3474404 | 55030.7 |
| transcriptional regulator mode | HMPREF3040_03630 | Not Available | Negative | 3474460 - 3475248 | 28282.9 |
| hypothetical protein | HMPREF3040_03631 | Not Available | Positive | 3475377 - 3475526 | 5300.82 |
| molybdate abc transporter, periplasmic molybdate-binding protein | HMPREF3040_03632 | Not Available | Positive | 3475693 - 3476466 | 27399.5 |
| molybdate abc transporter, permease protein | HMPREF3040_03633 | Not Available | Positive | 3476466 - 3477155 | 24940.3 |
| molybdate abc transporter, atp-binding protein | HMPREF3040_03634 | Not Available | Positive | 3477158 - 3478216 | 39132.9 |
| cof-like hydrolase | HMPREF3040_03635 | Not Available | Negative | 3478217 - 3479137 | 33879.5 |
| 6-phosphogluconolactonase | HMPREF3040_03636 | Not Available | Positive | 3479190 - 3480185 | 36309.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





