Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03607 | Not Available | Negative | 3456444 - 3457034 | 22930.4 |
| hypothetical protein | HMPREF3040_03608 | Not Available | Positive | 3457061 - 3457207 | 5652.75 |
| nuclease-like protein | HMPREF3040_03609 | Not Available | Negative | 3457327 - 3457800 | 18357.3 |
| hypothetical protein | HMPREF3040_03610 | Not Available | Positive | 3457909 - 3458163 | 9000.66 |
| fertility inhibition protein | HMPREF3040_03611 | Not Available | Negative | 3458374 - 3458934 | 21266.8 |
| hydrolase, alpha/beta domain protein | HMPREF3040_03612 | Not Available | Negative | 3459037 - 3459897 | 31675.9 |
| type-f conjugative transfer system pilin acetylase trax | HMPREF3040_03613 | Not Available | Negative | 3459994 - 3460643 | 23923.6 |
| protein pemk | HMPREF3040_03614 | Not Available | Negative | 3460868 - 3461200 | 11881.5 |
| spovt/abrb-like protein | HMPREF3040_03615 | Not Available | Negative | 3461202 - 3461459 | 9333.16 |
| caax amino terminal protease family protein | HMPREF3040_03616 | Not Available | Negative | 3461552 - 3462205 | 24308.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





