Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03504 | Not Available | Positive | 3379487 - 3379612 | 4784.05 |
| hypothetical protein | HMPREF3040_03505 | Not Available | Positive | 3379609 - 3379971 | 14184.9 |
| nodulation efficiency protein d | HMPREF3040_03506 | Not Available | Negative | 3380156 - 3380614 | 16911.9 |
| spfh/band 7/phb domain protein | HMPREF3040_03507 | Not Available | Negative | 3380611 - 3381528 | 33745.1 |
| abc transporter, atp-binding protein | HMPREF3040_03508 | Not Available | Positive | 3381674 - 3382351 | 25355.4 |
| tigr00245 family protein | HMPREF3040_03509 | Not Available | Positive | 3382338 - 3383117 | 28166.5 |
| thioredoxin | HMPREF3040_03510 | Not Available | Negative | 3383180 - 3384070 | 33058.4 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3040_03511 | Not Available | Negative | 3384095 - 3384904 | 29397.9 |
| putative arylesterase | HMPREF3040_03512 | Not Available | Negative | 3384894 - 3385487 | 22190.7 |
| abc transporter, atp-binding protein | HMPREF3040_03513 | Not Available | Positive | 3385488 - 3386174 | 24534.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





