Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgc | HMPREF3040_00102 | Not Available | Positive | 83092 - 83496 | 13968.8 |
| flagellar hook capping protein | HMPREF3040_00103 | Not Available | Positive | 83508 - 84203 | 23617.5 |
| flagellar hook-basal body protein | HMPREF3040_00104 | Not Available | Positive | 84228 - 85433 | 41971.4 |
| flagellar basal-body rod protein flgf | HMPREF3040_00105 | Not Available | Positive | 85453 - 86208 | 25899.7 |
| flagellar basal-body rod protein flgg | HMPREF3040_00106 | Not Available | Positive | 86345 - 87127 | 27745.6 |
| flagellar l-ring protein flgh | HMPREF3040_00107 | Not Available | Positive | 87171 - 87878 | 24932.3 |
| flagellar p-ring protein flgi | HMPREF3040_00108 | Not Available | Positive | 87887 - 88987 | 38301.2 |
| flagellar rod assembly protein/muramidase flgj | HMPREF3040_00109 | Not Available | Positive | 88987 - 89928 | 34565.1 |
| flagellar hook-associated protein flgk | HMPREF3040_00110 | Not Available | Positive | 89994 - 91637 | 57901.1 |
| flagellar hook-associated protein 3 | HMPREF3040_00111 | Not Available | Positive | 91649 - 92602 | 34268.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





