Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03352 | Not Available | Negative | 3213994 - 3214119 | 4494.25 |
| s-formylglutathione hydrolase | HMPREF3040_03353 | Not Available | Negative | 3214147 - 3214980 | 31357.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | HMPREF3040_03354 | Not Available | Negative | 3215072 - 3216181 | 39335.2 |
| transcriptional repressor frmr | HMPREF3040_03355 | Not Available | Negative | 3216216 - 3216512 | 11228.5 |
| hypothetical protein | HMPREF3040_03356 | Not Available | Negative | 3216679 - 3217452 | 29084.9 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_03357 | Not Available | Negative | 3217454 - 3217894 | 15658.1 |
| glycosyltransferase, group 2 family protein | HMPREF3040_03358 | Not Available | Negative | 3218013 - 3219209 | 44725.0 |
| n-acetylglucosaminylphosphatidylinositol deacetylase | HMPREF3040_03359 | Not Available | Negative | 3219219 - 3219890 | 25099.3 |
| taurine abc transporter, periplasmic binding protein | HMPREF3040_03360 | Not Available | Positive | 3220442 - 3221461 | 36459.5 |
| abc transporter, atp-binding protein | HMPREF3040_03361 | Not Available | Positive | 3221474 - 3222241 | 28153.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





