Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci transcriptional repressor | HMPREF3040_03342 | Not Available | Negative | 3203514 - 3204605 | 38955.9 |
| iclr helix-turn-helix protein | HMPREF3040_03343 | Not Available | Negative | 3204673 - 3205620 | 35571.3 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | HMPREF3040_03344 | Not Available | Positive | 3205697 - 3207361 | 62216.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | HMPREF3040_03345 | Not Available | Positive | 3207363 - 3208307 | 34198.0 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | HMPREF3040_03346 | Not Available | Positive | 3208310 - 3209191 | 32587.2 |
| putative 2-oxopent-4-enoate hydratase | HMPREF3040_03347 | Not Available | Positive | 3209201 - 3210010 | 28910.6 |
| acetaldehyde dehydrogenase | HMPREF3040_03348 | Not Available | Positive | 3210007 - 3210957 | 33502.5 |
| 4-hydroxy-2-oxovalerate aldolase | HMPREF3040_03349 | Not Available | Positive | 3210954 - 3211967 | 36472.6 |
| mfs transporter, aromatic acid:h+ symporter family | HMPREF3040_03350 | Not Available | Positive | 3212210 - 3213382 | 40188.8 |
| hypothetical protein | HMPREF3040_03351 | Not Available | Positive | 3213483 - 3214022 | 19965.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





