Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system, lactose/cellobiose specific iib subunit | HMPREF3040_03322 | Not Available | Positive | 3185404 - 3185682 | 9804.04 |
| pts system, galactitol-specific iic component | HMPREF3040_03323 | Not Available | Positive | 3185694 - 3187007 | 46687.4 |
| putative sgc region protein sgcq | HMPREF3040_03324 | Not Available | Positive | 3187020 - 3187826 | 29356.3 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF3040_03325 | Not Available | Positive | 3187957 - 3188388 | 15638.6 |
| epimerase | HMPREF3040_03326 | Not Available | Positive | 3188400 - 3189032 | 23215.7 |
| putative sgc region transcriptional regulator | HMPREF3040_03327 | Not Available | Positive | 3189049 - 3189831 | 29269.3 |
| hypothetical protein | HMPREF3040_03328 | Not Available | Negative | 3189981 - 3190106 | 4614.5 |
| transcriptional regulator, iclr family protein | HMPREF3040_03329 | Not Available | Positive | 3190134 - 3190862 | 27790.0 |
| hypothetical protein | HMPREF3040_03330 | Not Available | Negative | 3191315 - 3191698 | 13993.2 |
| hypothetical protein | HMPREF3040_03331 | Not Available | Negative | 3191750 - 3192034 | 10408.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





