Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03312 | Not Available | Negative | 3179280 - 3179501 | 8675.34 |
| hypothetical protein | HMPREF3040_03313 | Not Available | Negative | 3179502 - 3179759 | 9295.91 |
| phospholipase d domain protein | HMPREF3040_03314 | Not Available | Negative | 3179906 - 3180892 | 36899.1 |
| hypothetical protein | HMPREF3040_03315 | Not Available | Negative | 3180889 - 3181098 | 8460.16 |
| hypothetical protein | HMPREF3040_03316 | Not Available | Negative | 3181342 - 3181494 | 5693.1 |
| hypothetical protein | HMPREF3040_03317 | Not Available | Positive | 3181884 - 3182141 | 9734.88 |
| acetyltransferase, gnat family | HMPREF3040_03318 | Not Available | Positive | 3182153 - 3182698 | 19958.1 |
| methyltransferase domain protein | HMPREF3040_03319 | Not Available | Positive | 3182754 - 3183500 | 27355.5 |
| hypothetical protein | HMPREF3040_03320 | Not Available | Negative | 3183565 - 3183687 | 4657.64 |
| m42 glutamyl aminopeptidase | HMPREF3040_03321 | Not Available | Positive | 3184286 - 3185407 | 40617.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





