Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03292 | Not Available | Positive | 3161148 - 3161843 | 25385.3 |
| tran protein | HMPREF3040_03293 | Not Available | Positive | 3161854 - 3162813 | 33808.2 |
| hypothetical protein | HMPREF3040_03294 | Not Available | Positive | 3162817 - 3164148 | 47384.6 |
| hypothetical protein | HMPREF3040_03295 | Not Available | Positive | 3164145 - 3164858 | 26065.2 |
| traq family protein | HMPREF3040_03296 | Not Available | Positive | 3164855 - 3165385 | 18236.6 |
| hypothetical protein | HMPREF3040_03297 | Not Available | Positive | 3165450 - 3165830 | 13018.8 |
| hypothetical protein | HMPREF3040_03298 | Not Available | Positive | 3165887 - 3166138 | 9118.84 |
| hypothetical protein | HMPREF3040_03299 | Not Available | Positive | 3166245 - 3166871 | 23780.8 |
| hypothetical protein | HMPREF3040_03300 | Not Available | Positive | 3166926 - 3167285 | 13610.2 |
| hypothetical protein | HMPREF3040_03301 | Not Available | Positive | 3167282 - 3167665 | 14821.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





