Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin, grxb family | HMPREF3040_00092 | Not Available | Negative | 75061 - 75660 | 22351.0 |
| multidrug resistance protein mdth | HMPREF3040_00093 | Not Available | Negative | 75772 - 76980 | 44366.0 |
| ribosomal-protein-alanine acetyltransferase | HMPREF3040_00094 | Not Available | Positive | 77216 - 77800 | 22675.1 |
| hypothetical protein | HMPREF3040_00095 | Not Available | Positive | 77811 - 78458 | 24181.8 |
| oxidoreductase, nad-binding domain protein | HMPREF3040_00096 | Not Available | Positive | 78460 - 79383 | 33669.4 |
| integral membrane protein mvin | HMPREF3040_00097 | Not Available | Positive | 79535 - 81028 | 53837.0 |
| flgn protein | HMPREF3040_00098 | Not Available | Negative | 81068 - 81484 | 15825.9 |
| flagellar biosynthesis anti-sigma factor flgm | HMPREF3040_00099 | Not Available | Negative | 81489 - 81782 | 10355.2 |
| flagella basal body p-ring formation protein flga | HMPREF3040_00100 | Not Available | Negative | 81858 - 82517 | 23419.4 |
| flagellar basal-body rod protein flgb | HMPREF3040_00101 | Not Available | Positive | 82672 - 83088 | 15241.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





