Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03252 | Not Available | Negative | 3130174 - 3130398 | 8565.33 |
| hypothetical protein | HMPREF3040_03253 | Not Available | Negative | 3130407 - 3131777 | 52381.1 |
| hypothetical protein | HMPREF3040_03254 | Not Available | Positive | 3131831 - 3131950 | 4792.91 |
| hypothetical protein | HMPREF3040_03255 | Not Available | Positive | 3131928 - 3132152 | 8832.8 |
| hypothetical protein | HMPREF3040_03256 | Not Available | Positive | 3132107 - 3132700 | 22245.6 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_03257 | Not Available | Negative | 3132982 - 3133569 | 22173.5 |
| hypothetical protein | HMPREF3040_03258 | Not Available | Positive | 3133869 - 3134210 | 13085.1 |
| addiction module toxin, rele/stbe family | HMPREF3040_03259 | Not Available | Negative | 3134406 - 3134687 | 10880.2 |
| addiction module antitoxin, relb/dinj family | HMPREF3040_03260 | Not Available | Negative | 3134684 - 3134953 | 10269.2 |
| hypothetical protein | HMPREF3040_03261 | Not Available | Negative | 3135008 - 3135166 | 5643.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





