Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline transport system permease protein prow | HMPREF3040_03222 | Not Available | Negative | 3103412 - 3104476 | 37592.0 |
| glycine betaine/l-proline transport atp-binding protein prov | HMPREF3040_03223 | Not Available | Negative | 3104469 - 3105671 | 44135.5 |
| hypothetical protein | HMPREF3040_03224 | Not Available | Negative | 3105661 - 3105873 | 8066.75 |
| ribonucleoside-diphosphate reductase, beta subunit | HMPREF3040_03225 | Not Available | Negative | 3106028 - 3106987 | 36429.0 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF3040_03226 | Not Available | Negative | 3106997 - 3109102 | 79044.9 |
| nrdi protein | HMPREF3040_03227 | Not Available | Negative | 3109123 - 3109524 | 15056.0 |
| glutaredoxin | HMPREF3040_03228 | Not Available | Negative | 3109521 - 3109766 | 9120.93 |
| alkylhydroperoxidase ahpd family core domain protein | HMPREF3040_03229 | Not Available | Negative | 3109975 - 3110406 | 16175.4 |
| transcriptional regulator, gntr family | HMPREF3040_03230 | Not Available | Positive | 3110494 - 3111828 | 49826.3 |
| hypothetical protein | HMPREF3040_03231 | Not Available | Negative | 3111885 - 3112226 | 12288.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





