Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03161 | Not Available | Negative | 3051956 - 3052516 | 21870.6 |
| hypothetical protein | HMPREF3040_03162 | Not Available | Negative | 3052727 - 3053013 | 11498.9 |
| hypothetical protein | HMPREF3040_03163 | Not Available | Negative | 3053033 - 3053209 | 6882.11 |
| hypothetical protein | HMPREF3040_03164 | Not Available | Negative | 3053196 - 3053855 | 25569.0 |
| hypothetical protein | HMPREF3040_03165 | Not Available | Negative | 3053879 - 3054670 | 30578.4 |
| hypothetical protein | HMPREF3040_03166 | Not Available | Negative | 3054660 - 3055841 | 42855.4 |
| hypothetical protein | HMPREF3040_03167 | Not Available | Positive | 3055920 - 3057632 | 62502.3 |
| hypothetical protein | HMPREF3040_03168 | Not Available | Positive | 3057629 - 3057925 | 11162.6 |
| hypothetical protein | HMPREF3040_03169 | Not Available | Positive | 3057906 - 3058115 | 8281.36 |
| hypothetical protein | HMPREF3040_03170 | Not Available | Positive | 3058128 - 3058532 | 14263.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





