Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03151 | Not Available | Positive | 3043365 - 3044330 | 36962.0 |
| hypothetical protein | HMPREF3040_03152 | Not Available | Positive | 3044371 - 3044772 | 15357.6 |
| hypothetical protein | HMPREF3040_03153 | Not Available | Negative | 3044991 - 3046778 | 67354.2 |
| hypothetical protein | HMPREF3040_03154 | Not Available | Positive | 3047034 - 3047237 | 7229.44 |
| bacterial group 1 ig-like protein | HMPREF3040_03155 | Not Available | Negative | 3047469 - 3047774 | 10184.7 |
| bacterial group 1 ig-like protein | HMPREF3040_03156 | Not Available | Negative | 3047775 - 3048918 | 37594.4 |
| n-acetyltransferase | HMPREF3040_03157 | Not Available | Negative | 3048979 - 3049824 | 32249.5 |
| flavin reductase-like domain protein | HMPREF3040_03158 | Not Available | Positive | 3050107 - 3050568 | 16768.1 |
| hypothetical protein | HMPREF3040_03159 | Not Available | Negative | 3050635 - 3050808 | 6582.83 |
| hypothetical protein | HMPREF3040_03160 | Not Available | Negative | 3050961 - 3051596 | 24895.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





