Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, luxr family | HMPREF3040_03132 | Not Available | Negative | 3031988 - 3032638 | 24931.0 |
| hypothetical protein | HMPREF3040_03131 | Not Available | Positive | 3032621 - 3032752 | 4730.86 |
| hypothetical protein | HMPREF3040_03133 | Not Available | Negative | 3033105 - 3033290 | 7090.75 |
| minor curlin subunit csgb | HMPREF3040_03134 | Not Available | Positive | 3033366 - 3033848 | 16934.0 |
| major curlin subunit csga | HMPREF3040_03135 | Not Available | Positive | 3033889 - 3034344 | 14993.0 |
| putative curli assembly protein csgc | HMPREF3040_03136 | Not Available | Positive | 3034403 - 3034735 | 11969.4 |
| hypothetical protein | HMPREF3040_03137 | Not Available | Positive | 3034856 - 3035167 | 11185.6 |
| hypothetical protein | HMPREF3040_03138 | Not Available | Positive | 3035196 - 3036386 | 43950.8 |
| protein psib | HMPREF3040_03139 | Not Available | Positive | 3036438 - 3036875 | 15979.1 |
| protein psia | HMPREF3040_03140 | Not Available | Positive | 3036872 - 3037591 | 27693.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





