Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03101 | Not Available | Positive | 3005532 - 3005762 | 8799.8 |
| hypothetical protein | HMPREF3040_03102 | Not Available | Positive | 3005726 - 3005884 | 5706.01 |
| pyrimidine utilization transport protein g | HMPREF3040_03103 | Not Available | Negative | 3005957 - 3007279 | 45368.2 |
| pyrimidine utilization flavin reductase protein f | HMPREF3040_03104 | Not Available | Negative | 3007300 - 3007794 | 17748.3 |
| nitroreductase family protein | HMPREF3040_03105 | Not Available | Negative | 3007805 - 3008395 | 21598.5 |
| pyrimidine utilization protein d | HMPREF3040_03106 | Not Available | Negative | 3008392 - 3009204 | 29422.5 |
| pyrimidine utilization protein | HMPREF3040_03107 | Not Available | Negative | 3009212 - 3009598 | 13779.6 |
| pyrimidine utilization protein b | HMPREF3040_03108 | Not Available | Negative | 3009610 - 3010305 | 25373.3 |
| pyrimidine utilization protein a | HMPREF3040_03109 | Not Available | Negative | 3010302 - 3011450 | 42193.1 |
| pyrimidine utilization regulatory protein r | HMPREF3040_03110 | Not Available | Positive | 3011681 - 3012319 | 23688.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





