Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00073 | Not Available | Negative | 60637 - 60780 | 4976.03 |
| glucans biosynthesis protein g | HMPREF3040_00074 | Not Available | Positive | 60968 - 62521 | 58651.5 |
| glucans biosynthesis glucosyltransferase h | HMPREF3040_00075 | Not Available | Positive | 62514 - 65057 | 96914.6 |
| hypothetical protein | HMPREF3040_00076 | Not Available | Positive | 65114 - 65239 | 4908.16 |
| hypothetical protein | HMPREF3040_00077 | Not Available | Positive | 65230 - 65457 | 8367.21 |
| putative acidic protein msyb | HMPREF3040_00078 | Not Available | Negative | 65458 - 65832 | 14288.9 |
| transporter, major facilitator family protein | HMPREF3040_00079 | Not Available | Negative | 65915 - 67141 | 43884.1 |
| lipid a biosynthesis lauroyl acyltransferase | HMPREF3040_00080 | Not Available | Negative | 67313 - 68233 | 35408.9 |
| rhodanese-like protein | HMPREF3040_00081 | Not Available | Positive | 68458 - 69510 | 39738.4 |
| ycei-like domain protein | HMPREF3040_00082 | Not Available | Negative | 69552 - 70127 | 20899.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





